Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14□□□□□ -0.17
Ssu72Q9CY97 AC161829.1-201ENSMUST00000220298 281 ntBASIC14□□□□□ -0.17
Ssu72Q9CY97 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ssu72Q9CY97 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssu72Q9CY97 Acot6-202ENSMUST00000222921 3622 ntBASIC14□□□□□ -0.17
Ssu72Q9CY97 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Gm44719-201ENSMUST00000206404 149 ntBASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ssu72Q9CY97 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm9385-201ENSMUST00000117563 472 ntBASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ssu72Q9CY97 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms