Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.3■□□□□ 0.36
RtcbQ99LF4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Gm38266-201ENSMUST00000194931 421 ntBASIC17.3■□□□□ 0.36
RtcbQ99LF4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RtcbQ99LF4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RtcbQ99LF4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Gm1335-201ENSMUST00000121653 386 ntBASIC17.29■□□□□ 0.36
RtcbQ99LF4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RtcbQ99LF4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Carlr-201ENSMUST00000181515 2574 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm13350-201ENSMUST00000120519 479 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm27501-201ENSMUST00000183599 107 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm27516-201ENSMUST00000184237 98 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm45930-201ENSMUST00000221330 292 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm24447-201ENSMUST00000083977 338 ntBASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RtcbQ99LF4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.27■□□□□ 0.36
RtcbQ99LF4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.27■□□□□ 0.36
RtcbQ99LF4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Gm7584-201ENSMUST00000175829 940 ntBASIC17.27■□□□□ 0.36
RtcbQ99LF4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Gm37008-201ENSMUST00000195712 319 ntBASIC17.27■□□□□ 0.36
RtcbQ99LF4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.27■□□□□ 0.36
RtcbQ99LF4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms