Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Gm37720-201ENSMUST00000195497 1241 ntBASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb3Q91XZ7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm12439-201ENSMUST00000117162 365 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm14542-201ENSMUST00000118460 1248 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm14494-201ENSMUST00000118786 435 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb3Q91XZ7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.15□□□□□ -0.15
Pcdhb3Q91XZ7 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.15□□□□□ -0.15
Pcdhb3Q91XZ7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 AC155266.1-201ENSMUST00000220762 904 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms