Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gm7775-201ENSMUST00000218871 853 ntBASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.27■□□□□ 0.35
Sf3a1Q8K4Z5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3a1Q8K4Z5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Gm9229-201ENSMUST00000222777 126 ntBASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3a1Q8K4Z5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.24■□□□□ 0.35
Sf3a1Q8K4Z5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms