Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Mir3113-201ENSMUST00000175478 76 ntBASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim4Q8C1Q6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm12260-201ENSMUST00000122447 411 ntBASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm27741-201ENSMUST00000185060 237 ntBASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Smim4Q8C1Q6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Gm11025-201ENSMUST00000140773 466 ntBASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms