Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Gm6222-202ENSMUST00000182143 629 ntBASIC19.71■□□□□ 0.75
Usp54Q8BL06 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC19.7■□□□□ 0.74
Usp54Q8BL06 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm38144-201ENSMUST00000192790 465 ntBASIC19.7■□□□□ 0.74
Usp54Q8BL06 AC159747.1-201ENSMUST00000219903 265 ntBASIC19.7■□□□□ 0.74
Usp54Q8BL06 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.7■□□□□ 0.74
Usp54Q8BL06 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Gm4857-201ENSMUST00000192718 785 ntBASIC19.7■□□□□ 0.74
Usp54Q8BL06 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Usp54Q8BL06 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm14608-201ENSMUST00000120030 1553 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm7895-201ENSMUST00000187459 1173 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Ighv1-62-201ENSMUST00000193406 350 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm18056-201ENSMUST00000207670 568 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm18061-201ENSMUST00000208350 562 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm18063-201ENSMUST00000208529 568 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Gm18052-201ENSMUST00000208750 559 ntBASIC19.69■□□□□ 0.74
Usp54Q8BL06 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp54Q8BL06 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Gm6023-201ENSMUST00000118217 606 ntBASIC19.68■□□□□ 0.74
Usp54Q8BL06 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC19.68■□□□□ 0.74
Usp54Q8BL06 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Gm25261-201ENSMUST00000157416 134 ntBASIC19.68■□□□□ 0.74
Usp54Q8BL06 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.68■□□□□ 0.74
Usp54Q8BL06 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Usp54Q8BL06 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp54Q8BL06 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp54Q8BL06 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms