Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gm14494-201ENSMUST00000118786 435 ntBASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf38Q8BI21 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf38Q8BI21 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.62□□□□□ -0.23
Rnf38Q8BI21 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms