Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gm2810-201ENSMUST00000118681 990 ntBASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gm2451-201ENSMUST00000199447 999 ntBASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gm10290-201ENSMUST00000200451 999 ntBASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.55■□□□□ 0.24
Samm50Q8BGH2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Samm50Q8BGH2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Gm7774-201ENSMUST00000200064 533 ntBASIC16.54■□□□□ 0.24
Samm50Q8BGH2 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.54■□□□□ 0.24
Samm50Q8BGH2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Samm50Q8BGH2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms