Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gm18827-201ENSMUST00000188341 790 ntBASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf38bQ80SY5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Gm15483-201ENSMUST00000120338 456 ntBASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf38bQ80SY5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Mir6392-201ENSMUST00000184924 108 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Gm27892-201ENSMUST00000185017 106 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Gm10478-201ENSMUST00000084451 396 ntBASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf38bQ80SY5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms