Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.05□□□□□ -0.32
Pif1Q80SX8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pif1Q80SX8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.04□□□□□ -0.32
Pif1Q80SX8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.04□□□□□ -0.32
Pif1Q80SX8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gm10275-202ENSMUST00000168697 495 ntBASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gm10275-201ENSMUST00000092620 635 ntBASIC13.04□□□□□ -0.32
Pif1Q80SX8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pif1Q80SX8 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.04□□□□□ -0.32
Pif1Q80SX8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pif1Q80SX8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.03□□□□□ -0.32
Pif1Q80SX8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Gm15824-201ENSMUST00000119516 955 ntBASIC13.03□□□□□ -0.32
Pif1Q80SX8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pif1Q80SX8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms