Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rif1Q6PR54 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.87□□□□□ -0.51
Rif1Q6PR54 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rif1Q6PR54 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rif1Q6PR54 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm11964-201ENSMUST00000120982 444 ntBASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.86□□□□□ -0.51
Rif1Q6PR54 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.86□□□□□ -0.51
Rif1Q6PR54 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rif1Q6PR54 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gm11803-201ENSMUST00000119966 444 ntBASIC11.85□□□□□ -0.51
Rif1Q6PR54 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Dancr-204ENSMUST00000132389 2347 ntBASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Gm28450-201ENSMUST00000187349 638 ntBASIC11.85□□□□□ -0.51
Rif1Q6PR54 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rif1Q6PR54 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.84□□□□□ -0.51
Rif1Q6PR54 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.84□□□□□ -0.51
Rif1Q6PR54 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms