Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nudcd1Q6PIP5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Gm5745-201ENSMUST00000183748 313 ntBASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Gm5425-201ENSMUST00000214125 459 ntBASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nudcd1Q6PIP5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Nudcd1Q6PIP5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms