Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm10275-202ENSMUST00000168697 495 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm8584-201ENSMUST00000171982 758 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm10275-201ENSMUST00000092620 635 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Gm17968-201ENSMUST00000194902 784 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Gm6443-201ENSMUST00000203599 874 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd3Q6P9Z1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Psmb5-202ENSMUST00000227257 622 ntBASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms