Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.7■□□□□ 0.26
Col11a2Q64739 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Col11a2Q64739 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col11a2Q64739 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Col11a2Q64739 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Gm24548-201ENSMUST00000158650 108 ntBASIC16.7■□□□□ 0.26
Col11a2Q64739 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col11a2Q64739 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.7■□□□□ 0.26
Col11a2Q64739 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col11a2Q64739 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm24830-201ENSMUST00000102024 166 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm24990-201ENSMUST00000157406 323 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm25890-201ENSMUST00000177643 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm22614-201ENSMUST00000178300 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Col11a2Q64739 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm22042-201ENSMUST00000082989 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm26232-201ENSMUST00000083360 166 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm24136-201ENSMUST00000083374 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Gm26110-201ENSMUST00000083971 165 ntBASIC16.69■□□□□ 0.26
Col11a2Q64739 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.69■□□□□ 0.26
Col11a2Q64739 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col11a2Q64739 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.69■□□□□ 0.26
Col11a2Q64739 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col11a2Q64739 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Col11a2Q64739 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Gm25732-201ENSMUST00000175168 60 ntBASIC16.68■□□□□ 0.26
Col11a2Q64739 Gm38144-201ENSMUST00000192790 465 ntBASIC16.68■□□□□ 0.26
Col11a2Q64739 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.68■□□□□ 0.26
Col11a2Q64739 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.68■□□□□ 0.26
Col11a2Q64739 Morn2-202ENSMUST00000227729 656 ntBASIC16.68■□□□□ 0.26
Col11a2Q64739 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.68■□□□□ 0.26
Col11a2Q64739 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col11a2Q64739 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col11a2Q64739 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.67■□□□□ 0.26
Col11a2Q64739 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.67■□□□□ 0.26
Col11a2Q64739 Gm28693-202ENSMUST00000190758 331 ntBASIC16.67■□□□□ 0.26
Col11a2Q64739 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col11a2Q64739 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col11a2Q64739 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col11a2Q64739 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col11a2Q64739 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms