Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.83■□□□□ 0.44
Clcn1Q64347 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clcn1Q64347 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.82■□□□□ 0.44
Clcn1Q64347 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Clcn1Q64347 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn1Q64347 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn1Q64347 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.81■□□□□ 0.44
Clcn1Q64347 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.81■□□□□ 0.44
Clcn1Q64347 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn1Q64347 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn1Q64347 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Clcn1Q64347 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm12957-201ENSMUST00000117835 377 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm15240-201ENSMUST00000118156 720 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm12134-201ENSMUST00000122109 520 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.8■□□□□ 0.44
Clcn1Q64347 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn1Q64347 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clcn1Q64347 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms