Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox17Q61473 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox17Q61473 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox17Q61473 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Sox17Q61473 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Gm7230-201ENSMUST00000173026 815 ntBASIC13.23□□□□□ -0.29
Sox17Q61473 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox17Q61473 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sox17Q61473 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox17Q61473 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox17Q61473 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox17Q61473 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox17Q61473 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox17Q61473 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox17Q61473 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Gm13597-201ENSMUST00000121239 375 ntBASIC13.22□□□□□ -0.29
Sox17Q61473 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.22□□□□□ -0.29
Sox17Q61473 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox17Q61473 Gm43347-201ENSMUST00000200226 580 ntBASIC13.22□□□□□ -0.29
Sox17Q61473 Gm9182-201ENSMUST00000217829 639 ntBASIC13.22□□□□□ -0.29
Sox17Q61473 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox17Q61473 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox17Q61473 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
Sox17Q61473 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox17Q61473 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Sox17Q61473 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox17Q61473 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Sox17Q61473 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms