Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.63□□□□□ -0.23
Col12a1Q60847 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.63□□□□□ -0.23
Col12a1Q60847 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.63□□□□□ -0.23
Col12a1Q60847 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.63□□□□□ -0.23
Col12a1Q60847 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.63□□□□□ -0.23
Col12a1Q60847 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Gm13813-201ENSMUST00000120998 787 ntBASIC13.62□□□□□ -0.23
Col12a1Q60847 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Gm24420-201ENSMUST00000176676 59 ntBASIC13.62□□□□□ -0.23
Col12a1Q60847 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.62□□□□□ -0.23
Col12a1Q60847 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.62□□□□□ -0.23
Col12a1Q60847 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.62□□□□□ -0.23
Col12a1Q60847 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col12a1Q60847 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.61□□□□□ -0.23
Col12a1Q60847 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col12a1Q60847 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.61□□□□□ -0.23
Col12a1Q60847 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm24548-201ENSMUST00000158650 108 ntBASIC13.61□□□□□ -0.23
Col12a1Q60847 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.61□□□□□ -0.23
Col12a1Q60847 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col12a1Q60847 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.61□□□□□ -0.23
Col12a1Q60847 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.61□□□□□ -0.23
Col12a1Q60847 Mospd4-201ENSMUST00000180618 576 ntBASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.61□□□□□ -0.23
Col12a1Q60847 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col12a1Q60847 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms