Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Gm8344-201ENSMUST00000119813 856 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1brtQ3UNC9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.11□□□□□ -0.79
Cks1brtQ3UNC9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms