Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf1Q07802 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf1Q07802 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.3□□□□□ -0.12
Ebf1Q07802 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.3□□□□□ -0.12
Ebf1Q07802 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.3□□□□□ -0.12
Ebf1Q07802 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.3□□□□□ -0.12
Ebf1Q07802 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf1Q07802 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf1Q07802 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ebf1Q07802 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.3□□□□□ -0.12
Ebf1Q07802 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf1Q07802 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm17150-201ENSMUST00000165577 381 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm9002-201ENSMUST00000178437 499 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm6266-201ENSMUST00000203844 806 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.29□□□□□ -0.12
Ebf1Q07802 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ebf1Q07802 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf1Q07802 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.28□□□□□ -0.12
Ebf1Q07802 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ebf1Q07802 BC001981-202ENSMUST00000191393 1545 ntBASIC14.28□□□□□ -0.12
Ebf1Q07802 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf1Q07802 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf1Q07802 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms