Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.87□□□□□ -0.19
Sox4Q06831 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox4Q06831 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.87□□□□□ -0.19
Sox4Q06831 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sox4Q06831 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox4Q06831 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.87□□□□□ -0.19
Sox4Q06831 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox4Q06831 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox4Q06831 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.87□□□□□ -0.19
Sox4Q06831 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.87□□□□□ -0.19
Sox4Q06831 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.87□□□□□ -0.19
Sox4Q06831 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox4Q06831 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox4Q06831 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox4Q06831 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox4Q06831 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Sox4Q06831 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox4Q06831 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Gm14719-201ENSMUST00000121891 340 ntBASIC13.86□□□□□ -0.19
Sox4Q06831 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.86□□□□□ -0.19
Sox4Q06831 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox4Q06831 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.86□□□□□ -0.19
Sox4Q06831 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.86□□□□□ -0.19
Sox4Q06831 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.86□□□□□ -0.19
Sox4Q06831 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.86□□□□□ -0.19
Sox4Q06831 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox4Q06831 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox4Q06831 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sox4Q06831 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sox4Q06831 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sox4Q06831 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Gm15393-201ENSMUST00000120499 219 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.85□□□□□ -0.19
Sox4Q06831 Gm27838-201ENSMUST00000184829 128 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox4Q06831 Gm18027-201ENSMUST00000218947 619 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.85□□□□□ -0.19
Sox4Q06831 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox4Q06831 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sox4Q06831 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms