Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Mir125a-201ENSMUST00000083545 68 ntBASIC14.34□□□□□ -0.11
Gabpb1Q00420 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.33□□□□□ -0.11
Gabpb1Q00420 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gabpb1Q00420 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gabpb1Q00420 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gabpb1Q00420 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.33□□□□□ -0.12
Gabpb1Q00420 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Gm10253-201ENSMUST00000194270 940 ntBASIC14.33□□□□□ -0.12
Gabpb1Q00420 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gabpb1Q00420 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Gabpb1Q00420 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Gm26308-201ENSMUST00000157768 69 ntBASIC14.32□□□□□ -0.12
Gabpb1Q00420 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Gabpb1Q00420 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.32□□□□□ -0.12
Gabpb1Q00420 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gabpb1Q00420 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms