Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Gm15653-201ENSMUST00000119247 907 ntBASIC14.12□□□□□ -0.15
Lim2P56563 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.12□□□□□ -0.15
Lim2P56563 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lim2P56563 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Lim2P56563 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.11□□□□□ -0.15
Lim2P56563 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.11□□□□□ -0.15
Lim2P56563 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.11□□□□□ -0.15
Lim2P56563 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Lim2P56563 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Gm46209-201ENSMUST00000217912 553 ntBASIC14.11□□□□□ -0.15
Lim2P56563 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Gm9063-201ENSMUST00000223299 582 ntBASIC14.11□□□□□ -0.15
Lim2P56563 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lim2P56563 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lim2P56563 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lim2P56563 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lim2P56563 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lim2P56563 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Gm12151-201ENSMUST00000121374 290 ntBASIC14.1□□□□□ -0.15
Lim2P56563 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.1□□□□□ -0.15
Lim2P56563 Gm8584-201ENSMUST00000171982 758 ntBASIC14.1□□□□□ -0.15
Lim2P56563 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.1□□□□□ -0.15
Lim2P56563 Gm27989-201ENSMUST00000184721 107 ntBASIC14.1□□□□□ -0.15
Lim2P56563 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lim2P56563 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Lim2P56563 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.1□□□□□ -0.15
Lim2P56563 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lim2P56563 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.09□□□□□ -0.15
Lim2P56563 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms