Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Abcd3P55096 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Abcd3P55096 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.63□□□□□ -0.39
Abcd3P55096 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Gm9719-201ENSMUST00000162765 543 ntBASIC12.63□□□□□ -0.39
Abcd3P55096 AA543401-201ENSMUST00000164248 1269 ntBASIC12.63□□□□□ -0.39
Abcd3P55096 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.63□□□□□ -0.39
Abcd3P55096 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Chchd1-203ENSMUST00000224633 557 ntBASIC12.63□□□□□ -0.39
Abcd3P55096 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Abcd3P55096 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Abcd3P55096 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abcd3P55096 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.62□□□□□ -0.39
Abcd3P55096 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.62□□□□□ -0.39
Abcd3P55096 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.62□□□□□ -0.39
Abcd3P55096 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.62□□□□□ -0.39
Abcd3P55096 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.62□□□□□ -0.39
Abcd3P55096 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Mir125a-201ENSMUST00000083545 68 ntBASIC12.62□□□□□ -0.39
Abcd3P55096 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Abcd3P55096 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Abcd3P55096 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abcd3P55096 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.61□□□□□ -0.39
Abcd3P55096 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.61□□□□□ -0.39
Abcd3P55096 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Abcd3P55096 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.61□□□□□ -0.39
Abcd3P55096 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.61□□□□□ -0.39
Abcd3P55096 Gm5566-201ENSMUST00000116118 459 ntBASIC12.61□□□□□ -0.39
Abcd3P55096 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.61□□□□□ -0.39
Abcd3P55096 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abcd3P55096 Gm24158-201ENSMUST00000175263 71 ntBASIC12.61□□□□□ -0.39
Abcd3P55096 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms