Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.75■□□□□ 0.43
Msh6P54276 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.75■□□□□ 0.43
Msh6P54276 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Gm27847-201ENSMUST00000183711 107 ntBASIC17.75■□□□□ 0.43
Msh6P54276 Gm27375-201ENSMUST00000183799 107 ntBASIC17.75■□□□□ 0.43
Msh6P54276 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.75■□□□□ 0.43
Msh6P54276 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.74■□□□□ 0.43
Msh6P54276 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Msh6P54276 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Msh6P54276 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Msh6P54276 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.74■□□□□ 0.43
Msh6P54276 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Msh6P54276 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.74■□□□□ 0.43
Msh6P54276 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Msh6P54276 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh6P54276 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Msh6P54276 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Msh6P54276 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Msh6P54276 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Msh6P54276 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Msh6P54276 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Msh6P54276 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.73■□□□□ 0.43
Msh6P54276 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Msh6P54276 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.73■□□□□ 0.43
Msh6P54276 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Msh6P54276 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh6P54276 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.72■□□□□ 0.43
Msh6P54276 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.72■□□□□ 0.43
Msh6P54276 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 Gm8927-201ENSMUST00000181978 981 ntBASIC17.72■□□□□ 0.43
Msh6P54276 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.72■□□□□ 0.43
Msh6P54276 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.72■□□□□ 0.43
Msh6P54276 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.72■□□□□ 0.43
Msh6P54276 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.72■□□□□ 0.43
Msh6P54276 Gm3222-201ENSMUST00000071282 990 ntBASIC17.72■□□□□ 0.43
Msh6P54276 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.72■□□□□ 0.43
Msh6P54276 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh6P54276 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms