Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
SftpbP50405 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.44□□□□□ -0.1
SftpbP50405 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
SftpbP50405 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.44□□□□□ -0.1
SftpbP50405 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.44□□□□□ -0.1
SftpbP50405 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.44□□□□□ -0.1
SftpbP50405 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SftpbP50405 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.44□□□□□ -0.1
SftpbP50405 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
SftpbP50405 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SftpbP50405 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.43□□□□□ -0.1
SftpbP50405 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.43□□□□□ -0.1
SftpbP50405 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Gm6973-201ENSMUST00000117080 721 ntBASIC14.43□□□□□ -0.1
SftpbP50405 Gm15427-201ENSMUST00000117288 531 ntBASIC14.43□□□□□ -0.1
SftpbP50405 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.43□□□□□ -0.1
SftpbP50405 Gm12260-201ENSMUST00000122447 411 ntBASIC14.43□□□□□ -0.1
SftpbP50405 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SftpbP50405 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.43□□□□□ -0.1
SftpbP50405 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SftpbP50405 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SftpbP50405 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SftpbP50405 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SftpbP50405 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.43□□□□□ -0.1
SftpbP50405 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.43□□□□□ -0.1
SftpbP50405 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SftpbP50405 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
SftpbP50405 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Gm27741-201ENSMUST00000185060 237 ntBASIC14.42□□□□□ -0.1
SftpbP50405 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.42□□□□□ -0.1
SftpbP50405 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpbP50405 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SftpbP50405 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SftpbP50405 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SftpbP50405 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.41□□□□□ -0.1
SftpbP50405 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms