Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.7□□□□□ -0.54
Nkx2-1P50220 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.69□□□□□ -0.54
Nkx2-1P50220 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-1P50220 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gm5682-201ENSMUST00000173402 505 ntBASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gm18041-201ENSMUST00000218210 618 ntBASIC11.68□□□□□ -0.54
Nkx2-1P50220 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms