Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC9.12□□□□□ -0.95
Xcl1P47993 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC9.12□□□□□ -0.95
Xcl1P47993 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.12□□□□□ -0.95
Xcl1P47993 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Xcl1P47993 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.12□□□□□ -0.95
Xcl1P47993 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Xcl1P47993 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Xcl1P47993 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.11□□□□□ -0.95
Xcl1P47993 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
Xcl1P47993 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Xcl1P47993 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
Xcl1P47993 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Gm19164-201ENSMUST00000210667 640 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 Gm10493-201ENSMUST00000097270 612 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Xcl1P47993 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Xcl1P47993 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.11□□□□□ -0.95
Xcl1P47993 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Xcl1P47993 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms