Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.62□□□□□ -0.23
Tnfsf4P43488 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Gm20553-201ENSMUST00000204205 844 ntBASIC13.62□□□□□ -0.23
Tnfsf4P43488 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Gm1401-201ENSMUST00000122048 772 ntBASIC13.61□□□□□ -0.23
Tnfsf4P43488 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Mir8117-201ENSMUST00000184773 107 ntBASIC13.61□□□□□ -0.23
Tnfsf4P43488 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.61□□□□□ -0.23
Tnfsf4P43488 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf4P43488 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Gm5364-201ENSMUST00000216789 889 ntBASIC13.6□□□□□ -0.23
Tnfsf4P43488 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.6□□□□□ -0.23
Tnfsf4P43488 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfsf4P43488 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms