Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.75□□□□□ -0.53
Abca1P41233 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Gm27892-201ENSMUST00000185017 106 ntBASIC11.75□□□□□ -0.53
Abca1P41233 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.75□□□□□ -0.53
Abca1P41233 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Abca1P41233 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.75□□□□□ -0.53
Abca1P41233 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.75□□□□□ -0.53
Abca1P41233 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.75□□□□□ -0.53
Abca1P41233 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Abca1P41233 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Abca1P41233 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.75□□□□□ -0.53
Abca1P41233 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.74□□□□□ -0.53
Abca1P41233 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Abca1P41233 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.74□□□□□ -0.53
Abca1P41233 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Abca1P41233 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Abca1P41233 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Abca1P41233 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.74□□□□□ -0.53
Abca1P41233 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.74□□□□□ -0.53
Abca1P41233 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Abca1P41233 Gm15823-201ENSMUST00000064305 670 ntBASIC11.74□□□□□ -0.53
Abca1P41233 Mir125a-201ENSMUST00000083545 68 ntBASIC11.74□□□□□ -0.53
Abca1P41233 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Abca1P41233 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.73□□□□□ -0.53
Abca1P41233 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.73□□□□□ -0.53
Abca1P41233 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Abca1P41233 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Abca1P41233 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms