Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdh4P39038 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh4P39038 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh4P39038 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh4P39038 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Gm12428-201ENSMUST00000119844 727 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdh4P39038 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh4P39038 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gm46209-201ENSMUST00000217912 553 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdh4P39038 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdh4P39038 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh4P39038 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh4P39038 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.51□□□□□ -0.25
Cdh4P39038 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh4P39038 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdh4P39038 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdh4P39038 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh4P39038 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdh4P39038 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Gm27306-201ENSMUST00000183970 107 ntBASIC13.5□□□□□ -0.25
Cdh4P39038 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdh4P39038 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh4P39038 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.5□□□□□ -0.25
Cdh4P39038 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.5□□□□□ -0.25
Cdh4P39038 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Cdh4P39038 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh4P39038 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.5□□□□□ -0.25
Cdh4P39038 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh4P39038 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh4P39038 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh4P39038 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh4P39038 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh4P39038 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.49□□□□□ -0.25
Cdh4P39038 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms