Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmga1P17095 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.36□□□□□ -0.11
Hmga1P17095 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Mir698-201ENSMUST00000102164 109 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmga1P17095 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hmga1P17095 Gm15806-201ENSMUST00000120696 955 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmga1P17095 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Gm26464-201ENSMUST00000157094 305 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmga1P17095 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.35□□□□□ -0.11
Hmga1P17095 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmga1P17095 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga1P17095 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.34□□□□□ -0.11
Hmga1P17095 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.34□□□□□ -0.11
Hmga1P17095 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.34□□□□□ -0.11
Hmga1P17095 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.34□□□□□ -0.11
Hmga1P17095 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga1P17095 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga1P17095 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmga1P17095 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.33□□□□□ -0.11
Hmga1P17095 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmga1P17095 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmga1P17095 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmga1P17095 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hmga1P17095 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmga1P17095 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm27772-201ENSMUST00000184900 187 ntBASIC14.33□□□□□ -0.12
Hmga1P17095 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmga1P17095 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmga1P17095 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmga1P17095 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Hmga1P17095 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms