Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm14042-201ENSMUST00000120139 833 ntBASIC13.42□□□□□ -0.26
Msx1P13297 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.42□□□□□ -0.26
Msx1P13297 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.42□□□□□ -0.26
Msx1P13297 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.42□□□□□ -0.26
Msx1P13297 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Gm18062-201ENSMUST00000208020 547 ntBASIC13.42□□□□□ -0.26
Msx1P13297 Gm18055-201ENSMUST00000208254 547 ntBASIC13.42□□□□□ -0.26
Msx1P13297 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.42□□□□□ -0.26
Msx1P13297 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.42□□□□□ -0.26
Msx1P13297 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Msx1P13297 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Msx1P13297 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Msx1P13297 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Msx1P13297 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Msx1P13297 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Msx1P13297 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.41□□□□□ -0.26
Msx1P13297 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.41□□□□□ -0.26
Msx1P13297 Gm12138-201ENSMUST00000122180 951 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.41□□□□□ -0.26
Msx1P13297 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Gm12091-201ENSMUST00000146791 830 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Gm18018-201ENSMUST00000198273 408 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.41□□□□□ -0.26
Msx1P13297 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.41□□□□□ -0.26
Msx1P13297 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.41□□□□□ -0.26
Msx1P13297 Shd-206ENSMUST00000225145 998 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.41□□□□□ -0.26
Msx1P13297 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Msx1P13297 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.41□□□□□ -0.26
Msx1P13297 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msx1P13297 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.4□□□□□ -0.26
Msx1P13297 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Msx1P13297 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gm15626-201ENSMUST00000117478 868 ntBASIC13.4□□□□□ -0.26
Msx1P13297 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 Gm37230-201ENSMUST00000194491 818 ntBASIC13.4□□□□□ -0.26
Msx1P13297 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gm20445-201ENSMUST00000061905 565 ntBASIC13.4□□□□□ -0.26
Msx1P13297 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.4□□□□□ -0.26
Msx1P13297 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msx1P13297 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Msx1P13297 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms