Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.8□□□□□ -0.52
CfdP03953 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.8□□□□□ -0.52
CfdP03953 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
CfdP03953 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CfdP03953 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.79□□□□□ -0.52
CfdP03953 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
CfdP03953 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CfdP03953 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.79□□□□□ -0.52
CfdP03953 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.79□□□□□ -0.52
CfdP03953 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.79□□□□□ -0.52
CfdP03953 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CfdP03953 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
CfdP03953 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
CfdP03953 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CfdP03953 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
CfdP03953 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.78□□□□□ -0.52
CfdP03953 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
CfdP03953 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CfdP03953 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CfdP03953 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.78□□□□□ -0.52
CfdP03953 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Gm7222-201ENSMUST00000117512 906 ntBASIC11.78□□□□□ -0.52
CfdP03953 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.78□□□□□ -0.52
CfdP03953 Gm7284-201ENSMUST00000131667 944 ntBASIC11.78□□□□□ -0.52
CfdP03953 Gm16026-204ENSMUST00000162652 683 ntBASIC11.78□□□□□ -0.52
CfdP03953 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CfdP03953 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.78□□□□□ -0.52
CfdP03953 Gm45098-201ENSMUST00000207179 657 ntBASIC11.78□□□□□ -0.52
CfdP03953 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CfdP03953 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.78□□□□□ -0.52
CfdP03953 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms