Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm37722-201ENSMUST00000193757 208 ntBASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm7977-201ENSMUST00000193787 748 ntBASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 AC164567.1-201ENSMUST00000219185 960 ntBASIC9.91□□□□□ -0.82
Hbb-b1P02088 AC135637.1-201ENSMUST00000227750 365 ntBASIC9.91□□□□□ -0.82
Hbb-b1P02088 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Zkscan4-202ENSMUST00000225845 1506 ntBASIC9.91□□□□□ -0.82
Hbb-b1P02088 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-b1P02088 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.9□□□□□ -0.82
Hbb-b1P02088 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Gm37856-201ENSMUST00000191634 999 ntBASIC9.9□□□□□ -0.82
Hbb-b1P02088 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 AC112142.1-201ENSMUST00000228796 918 ntBASIC9.9□□□□□ -0.82
Hbb-b1P02088 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-b1P02088 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Hbb-b1P02088 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hbb-b1P02088 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms