Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DhfrP00375 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DhfrP00375 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.78□□□□□ -0.36
DhfrP00375 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DhfrP00375 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.77□□□□□ -0.36
DhfrP00375 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.77□□□□□ -0.36
DhfrP00375 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.77□□□□□ -0.36
DhfrP00375 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DhfrP00375 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.77□□□□□ -0.37
DhfrP00375 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.77□□□□□ -0.37
DhfrP00375 Gm8000-201ENSMUST00000188378 592 ntBASIC12.77□□□□□ -0.37
DhfrP00375 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.77□□□□□ -0.37
DhfrP00375 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.77□□□□□ -0.37
DhfrP00375 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
DhfrP00375 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DhfrP00375 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DhfrP00375 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DhfrP00375 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
DhfrP00375 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
DhfrP00375 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
DhfrP00375 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
DhfrP00375 Gm27300-201ENSMUST00000184085 97 ntBASIC12.76□□□□□ -0.37
DhfrP00375 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.76□□□□□ -0.37
DhfrP00375 Gm27335-201ENSMUST00000184758 97 ntBASIC12.76□□□□□ -0.37
DhfrP00375 Mir8117-201ENSMUST00000184773 107 ntBASIC12.76□□□□□ -0.37
DhfrP00375 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
DhfrP00375 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
DhfrP00375 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DhfrP00375 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms