Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.8□□□□□ -0.36
Lmx1bO88609 Gm5186-201ENSMUST00000218781 920 ntBASIC12.8□□□□□ -0.36
Lmx1bO88609 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lmx1bO88609 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.8□□□□□ -0.36
Lmx1bO88609 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.8□□□□□ -0.36
Lmx1bO88609 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmx1bO88609 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.79□□□□□ -0.36
Lmx1bO88609 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.79□□□□□ -0.36
Lmx1bO88609 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.79□□□□□ -0.36
Lmx1bO88609 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lmx1bO88609 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmx1bO88609 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmx1bO88609 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm3436-201ENSMUST00000179930 840 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm24694-201ENSMUST00000180054 110 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm27663-201ENSMUST00000184839 110 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm9229-201ENSMUST00000222777 126 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lmx1bO88609 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Gm20445-201ENSMUST00000061905 565 ntBASIC12.78□□□□□ -0.36
Lmx1bO88609 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lmx1bO88609 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmx1bO88609 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lmx1bO88609 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.77□□□□□ -0.36
Lmx1bO88609 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.77□□□□□ -0.36
Lmx1bO88609 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lmx1bO88609 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms