Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Celf4-206ENSMUST00000224553 1729 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm4535-201ENSMUST00000182274 558 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm10355-201ENSMUST00000097146 517 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.8□□□□□ -0.52
Pfdn2O70591 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn2O70591 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn2O70591 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pfdn2O70591 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.79□□□□□ -0.52
Pfdn2O70591 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Gm18489-201ENSMUST00000172565 551 ntBASIC11.79□□□□□ -0.52
Pfdn2O70591 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn2O70591 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn2O70591 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.79□□□□□ -0.52
Pfdn2O70591 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.79□□□□□ -0.52
Pfdn2O70591 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms