Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Mir8109-201ENSMUST00000184375 117 ntBASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcf11G3X9Z4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm10339-203ENSMUST00000225409 1671 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Mir1247-201ENSMUST00000116706 82 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm9124-201ENSMUST00000191789 1092 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm9113-201ENSMUST00000192510 1018 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm9131-201ENSMUST00000193557 1089 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm9121-201ENSMUST00000193749 1071 ntBASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcf11G3X9Z4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcf11G3X9Z4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Gm8565-201ENSMUST00000183259 1014 ntBASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Gm38002-201ENSMUST00000193255 180 ntBASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Gm37922-201ENSMUST00000195596 455 ntBASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Gm43133-201ENSMUST00000197472 463 ntBASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms