Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh9F8VPK8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh9F8VPK8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh9F8VPK8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Gm2213-201ENSMUST00000197485 688 ntBASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh9F8VPK8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh9F8VPK8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms