Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm27301-201ENSMUST00000184012 127 ntBASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh1F7BJK1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh1F7BJK1 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm9385-201ENSMUST00000117563 472 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh1F7BJK1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh1F7BJK1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms