Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5640A3KG49 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Gm5682-201ENSMUST00000173402 505 ntBASIC14.31□□□□□ -0.12
Gm5640A3KG49 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.31□□□□□ -0.12
Gm5640A3KG49 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.31□□□□□ -0.12
Gm5640A3KG49 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.31□□□□□ -0.12
Gm5640A3KG49 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.31□□□□□ -0.12
Gm5640A3KG49 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5640A3KG49 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm17807-201ENSMUST00000186869 298 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Ank2-226ENSMUST00000189368 339 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5640A3KG49 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.3□□□□□ -0.12
Gm5640A3KG49 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5640A3KG49 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms