Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm24420-201ENSMUST00000176676 59 ntBASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm38671-201ENSMUST00000200573 130 ntBASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm6983-201ENSMUST00000214912 628 ntBASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a3A2ACT7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Mir1247-201ENSMUST00000116706 82 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a3A2ACT7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm13612-201ENSMUST00000119276 390 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm27572-201ENSMUST00000183702 255 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm40466-201ENSMUST00000212174 422 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a3A2ACT7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
Col9a3A2ACT7 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.67□□□□□ -0.22
Col9a3A2ACT7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a3A2ACT7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.67□□□□□ -0.22
Col9a3A2ACT7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a3A2ACT7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.67□□□□□ -0.22
Col9a3A2ACT7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms