Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm2445-201ENSMUST00000182798 989 ntBASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm21470-201ENSMUST00000187680 696 ntBASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm3436-201ENSMUST00000179930 840 ntBASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms