Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm14859-201ENSMUST00000117752 357 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm7284-201ENSMUST00000131667 944 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm10499-201ENSMUST00000174094 934 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms