Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm6376-201ENSMUST00000209407 580 ntBASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm18041-201ENSMUST00000218210 618 ntBASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cx3cr1Q9Z0D9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm43347-201ENSMUST00000200226 580 ntBASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.96□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cx3cr1Q9Z0D9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms