Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm8584-201ENSMUST00000171982 758 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm3375-201ENSMUST00000203929 796 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smco4Q9JIS3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm37856-201ENSMUST00000191634 999 ntBASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm43767-201ENSMUST00000198933 381 ntBASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco4Q9JIS3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms