Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gm13884-201ENSMUST00000118103 829 ntBASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndel1Q9ERR1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndel1Q9ERR1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Gm4899-201ENSMUST00000178708 719 ntBASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndel1Q9ERR1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Gm13036-201ENSMUST00000117799 748 ntBASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
Ndel1Q9ERR1 Gm25925-201ENSMUST00000158314 306 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms