Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm15957-201ENSMUST00000118893 974 ntBASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm6222-201ENSMUST00000120787 396 ntBASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mir1895-201ENSMUST00000122615 79 ntBASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm18737-201ENSMUST00000173594 937 ntBASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpne8Q9DC53 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpne8Q9DC53 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms