Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Gm37230-201ENSMUST00000194491 818 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Gm18246-201ENSMUST00000221023 728 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb4aQ9D6F9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubb4aQ9D6F9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb4aQ9D6F9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Tubb4aQ9D6F9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubb4aQ9D6F9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.22■□□□□ 0.03
Tubb4aQ9D6F9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubb4aQ9D6F9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.22■□□□□ 0.03
Tubb4aQ9D6F9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms