Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Rnf115Q9D0C1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm21854-201ENSMUST00000179901 471 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm9522-201ENSMUST00000182394 926 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm37917-201ENSMUST00000194711 392 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm18062-201ENSMUST00000208020 547 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm18055-201ENSMUST00000208254 547 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm9908-201ENSMUST00000211534 448 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf115Q9D0C1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf115Q9D0C1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf115Q9D0C1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms